Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQR--------------LKGADYVVTGDVTEFGRKE----VGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKV-----------LDLAMREAVNKLVN-AVDSGAWKPQNQ |
4UV2 Chain:A ((64-242)) | -----------------------------------------------------------------------------ATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGAR-YFGIGADTQYQLDQIAVNLRVVNVSTGEIL-SSVNTSKTILSYEVQAGVFRFIDY-------VGYTSNEPVMLCLMSAIETGVIFLINDGIDRGLWDLQNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UV2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43770 for 866 contacts (-50.5/contact) +
2D Compatibility (PS) -14865 + (NN) -5244 + (LL) 4460
1D Compatibility (HY) -12400 + (ID) 2250
Total energy: -74069.0 ( -85.53 by residue)
QMean score : 0.509
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