Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFAQNLLRLRQQNALTQRQMAERLGITVSQLRHFETKGGHPSLVVLQTIAGRFAVPLDWLVCERSERQALPEDLRL-QFEAIGRLRLDERRA-IRALLDDLIRQYMAKRNAAAKPLPAACAEATETSP
3OP9 Chain:A ((10-106))
--FAENLSRLKKEHGLKNHQIAELLNVQTRTVAYYMSGETKPDIEKLIRLATYFHLSIDELVGYVQE--VW-NDLSLKQWLLSLNLRSEEEIAKIKILVDTVETLYPN---------------------
General information:
TITO was launched using:
RESULT:
Template:
3OP9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44340 for 524 contacts (-84.6/contact) +
2D Compatibility (PS) -10097 + (NN) -5226 + (LL) 2048
1D Compatibility (HY) -6800 + (ID) 1500
Total energy: -65915.0 ( -125.79 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_3OP9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OP9-query.scw
PDB file :
Tito_Scwrl_3OP9.pdb
: