Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHCFANGNKRTAAAAATVFLLLNGIELTGPAQDFVDIMVALVTREASVQDLEDWMFYWHRPFDAYNLPDSDAFERMVARLGIG
3DD7 Chain:A ((64-123))
RGYIFNDANKRTALNSALLFLRRNGVQVF-DSPELADLTVGAATGEISVSSVADTLRRLYG-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3DD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29217 for 344 contacts (-84.9/contact) +
2D Compatibility (PS) -6626 + (NN) -4616 + (LL) 916
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -42043.0 ( -122.22 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_3DD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DD7-query.scw
PDB file :
Tito_Scwrl_3DD7.pdb
: