Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADIDALIAGAARD-GRALDRMLLGAVVENNDKKRFALSADGQRIRAVQGHSHAAVAIAYAPAVPPAVLYHGTASRFLDSIRERGLVPGSRHHVHLSARRATALEVGRRYG-SPVLLEIDARDMHLAGHLFHQAENGVWLTERVPVRFIREA
1WFX Chain:A ((3-177))
------VRLSKTLAGILRHHPGRYGVRLTREGWARVSEVVEGLRKAGWSWVEEWHIVGVALHDPKGRYELR--NGEIRARYGHSI-PVNVEPLPGEPPPILYHGTTEEALPLIMERGIMRGRRLKVHLTSSLEDAVSTGRRHGNLVAVLLVDVECLRRRGLKVERMSKTVYTVDWVPPECIAEV
General information:
TITO was launched using:
RESULT:
Template:
1WFX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96551 for 1312 contacts (-73.6/contact) +
2D Compatibility (PS) -19014 + (NN) -12159 + (LL) 736
1D Compatibility (HY) -9600 + (ID) 2800
Total energy: -139388.0 ( -106.24 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_1WFX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WFX-query.scw
PDB file :
Tito_Scwrl_1WFX.pdb
: