Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQPSENRLITSARYALCLLTASGVLLSGCASS--GVGSVAQTTRAEYYPSCYEPVSHLRSTDNAVRNSAITGAITGGLLGGLAGG-LASDENRGRNAALAAAGGALAGGAAGYYMEKQKQISDDRARI--GSYGTDVDRSTVEINRSVAYAKSAQSCYQSQFKALLDGRKNKSINEAEGRKRLAEIVSGLQETNALLVAANGRAGENISNYTQAYEKDLQQVGVPRAEVTKVAEAENRASTTKGGSKPKTGSNPKVPKEAVATEQTIRKAQDAQSEGNKVASQGQGMIREVCNSPD-MGDWAPPSCAKA |
| 2LGZ Chain:A ((1-273)) | --MGSSHHHHHHSSGLVPRGSHSTWVTRTAYSSPSVVLPSQTPDGKLALIDDFREAYYWLRMNSDEDSKVAAWWDYGYQIGGMADRTTLVDNNTWNNTHIAIVGKANASPEEKSYEILKEHDVDYVLVIFGGLIGFGGD----DINKFLWNIRISEGIWP-------EEIKERDFYTAEGEYRVDARASETMRNSLLYKMSYKDFPQLFNGGQATDRVRQQMIT------------------------PLDVPPLDYFDEVFTSENWNVRIYQLKKDDAQGRTLRDVGELTRSSTKTRRSIKRPELGLRV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 99689 for 2156 contacts (46.2/contact) +
2D Compatibility (PS) -28356 + (NN) -3034 + (LL) 2672
1D Compatibility (HY) 5600 + (ID) 1800
Total energy: 74771.0 ( 34.68 by residue)
QMean score : 0.095
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