Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------MNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASGMRASQDELGAAWLDAYL------TSPLWRFAIAPGLLGGEAVTGVVMPSIDRVGRYFPLTVACLLPANADLGGLVGGDDGWFEQVESLLLSTLEPEAEVEAFEQAVAQLPAPPCGPRIEQSLISG--NLLR----SEAVTPAQRLAALAQHACD------------GASHWWG-------RGSARISAGLMRYQGL------PP-----APAFGRFLTGEGEVIPLFPGIPG |
1NH1 Chain:A ((28-317)) | ALPGPSQRQLEVYDQCLIGAARWPDDSSKSNTPENRAYCQSMYNSIRSAGDEISRGGITSFEELWGR--ATEWRLSKLQRGEPLYSAFASERTSDTDAVTPLVKPYKSVLARVVDHEDAHDEIMQDNLFGDLNVKVYRQTAYLHG------------NVIPLNTFRVATDTEYLRDRVAHLRTELGAKALKQHLQRYNPDRIDHTNASYLPIIKDHLNDLYRQAISSDLSQAELISLIARTHWWAASAMPDQRGSAAKAEFAARAIASAHGIELPPFRNGNVSDIEAMLSGEEEFVEKYRSLLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58410 for 1471 contacts (-39.7/contact) +
2D Compatibility (PS) -21890 + (NN) -2401 + (LL) 736
1D Compatibility (HY) -4000 + (ID) 2300
Total energy: -88265.0 ( -60.00 by residue)
QMean score : 0.164
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