Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------MNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASGMRASQDELGAAWLDAYL------TSPLWRFAIAPGLLGGEAVTGVVMPSIDRVGRYFPLTVACLLPANADLGGLVGGDDGWFEQVESLLLSTLEPEAEVEAFEQAVAQLPAPPCGPRIEQSLISG--NLLR----SEAVTPAQRLAALAQHACD------------GASHWWG-------RGSARISAGLMRYQGL------PP-----APAFGRFLTGEGEVIPLFPGIPG
1NH1 Chain:A ((28-317))ALPGPSQRQLEVYDQCLIGAARWPDDSSKSNTPENRAYCQSMYNSIRSAGDEISRGGITSFEELWGR--ATEWRLSKLQRGEPLYSAFASERTSDTDAVTPLVKPYKSVLARVVDHEDAHDEIMQDNLFGDLNVKVYRQTAYLHG------------NVIPLNTFRVATDTEYLRDRVAHLRTELGAKALKQHLQRYNPDRIDHTNASYLPIIKDHLNDLYRQAISSDLSQAELISLIARTHWWAASAMPDQRGSAAKAEFAARAIASAHGIELPPFRNGNVSDIEAMLSGEEEFVEKYRSLLD


General information:
TITO was launched using:
RESULT:

Template: 1NH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58410 for 1471 contacts (-39.7/contact) +
2D Compatibility (PS) -21890 + (NN) -2401 + (LL) 736
1D Compatibility (HY) -4000 + (ID) 2300
Total energy: -88265.0 ( -60.00 by residue)
QMean score : 0.164

(partial model without unconserved sides chains):
PDB file : Tito_1NH1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NH1-query.scw
PDB file : Tito_Scwrl_1NH1.pdb: