Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPIEYIDRALALVVDRLARYPGYEVLLSAEKQL---QYIRSVL--LDRSLDRSALHR-LTLGSIAVKEFDETDPELSRALKDAYYVGIRTGRGLKVDLP
3RQ4 Chain:A ((15-97))
-------DLATSLVLDPYLGFRTHKMNVSPVPPLRRQQHLRSALETFLRQRDLEAAYRALTLGGWTARYFQSRGPRQEAALKTHVYRYLRAFLPESGFTI
General information:
TITO was launched using:
RESULT:
Template:
3RQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19658 for 486 contacts (-40.4/contact) +
2D Compatibility (PS) -7734 + (NN) 668 + (LL) 724
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -30900.0 ( -63.58 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_3RQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RQ4-query.scw
PDB file :
Tito_Scwrl_3RQ4.pdb
: