Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALSIVASGMVSAVG-LSAPASCAAIRCALDNFQETRFI---DQGGEWLLAASV---PLE---------QPWRGRAKLLKMAARAIDEALRGQPDLD----CTELPLLLCVAEGDRPG-------------RCAGLDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLI-QGGCRQVLVAGVDSFVSGPTLAAYEARERLLT-------SQNSNGFIPGEGAAAVLVAAPLH-EE---APQLLCIGLGFGVEKATVESEDLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLK---PKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGDG------------------------------PNVFCHLGNDAGERAAALLSYRRVRAA |
| 2HG4 Chain:A ((38-454)) | -GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEPDPDARLGGMLAAAGDFDAGFFGISPREALAMDPQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLE--GPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLT--APSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPEADG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190273 for 3122 contacts (-60.9/contact) +
2D Compatibility (PS) -35615 + (NN) -9336 + (LL) 484
1D Compatibility (HY) 4400 + (ID) 2600
Total energy: -232940.0 ( -74.61 by residue)
QMean score : 0.494
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