Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKKLS--PIFSNITGVVR---YQDLAYVASVS---DEIQEQNIA---------------------HSYVTEWDCGTWCVAGEDDD---MLPWEIVSATVVHEPVEQALFLGAR-GQVFCMGSG-DIHEEQ-------------LPDGDDAIGG-----------------------RGNMRGVACIDGVAYACGMDR----QVYRRFDENDWRAIDTGARPPAGSEAVVGFEAIG----------------GFGAREIYAVGWDGEIWQYD-GKRWQPRESPTNLILTAICCAEDGS----VYACGQAGTLLRGR-NDHWEIIAQDDVDED--LWSLAWFDGALYVSS---ATAVYTLV---GGHLKEVDF---------GDEQPQRCF-HLSAADGVLWSIAAKDIFSFDGQQWTRID |
3ACP Chain:A ((1-417)) | MTKTITVAHIQYDFKAVLEENDENDDEFYINVDKNLNEIKEHKIVVLGNSRGVDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDEVSQFCYVSDDESNGEVLEVGKNNFCALYNLSNP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ACP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146643 for 2185 contacts (-67.1/contact) +
2D Compatibility (PS) -32281 + (NN) -7408 + (LL) 228
1D Compatibility (HY) -13200 + (ID) 2850
Total energy: -202154.0 ( -92.52 by residue)
QMean score : 0.264
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