Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPDRMRGVKSDSPEQESADDALKRIVDGFQHFRREVFPEQQALFKKLANSQRPRAMFITCADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQ-MNGGVSTAIEYAVLALGVHHIIVCGHSDCGAMRAVLDPQT--LERMPTVKAWLRHAEVARTVVADNC-DCGASHDTLGVLTEENVVAQLDHLRTHPSVASRLASGQLFIHGWVYDIESAQIRAYDAKQGRFLPLDGEHPVPMATPAPRYLSS
1EKJ Chain:A ((12-221))-------------------EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDA-PFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLS---------------STFSV-


General information:
TITO was launched using:
RESULT:

Template: 1EKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117173 for 1517 contacts (-77.2/contact) +
2D Compatibility (PS) -21790 + (NN) -5656 + (LL) 812
1D Compatibility (HY) -13600 + (ID) 3450
Total energy: -160857.0 ( -106.04 by residue)
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_1EKJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EKJ-query.scw
PDB file : Tito_Scwrl_1EKJ.pdb: