Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLAIPMPERPRRARGRLQLLAIIGLVVGPMLLASAMYKWNFWVPQGRSYSGALIGNGQTPADLGVQGR-------SQGEQWQLLVTAPGTCGEDCQQLVYLARQINIALGRE-ASRAGHALAAS-GEL--PADFANL-VRQDYPRLQRYGLDPALYDKA----G---------------GGERPLLWVVDPHGNLVLRYDAKA--NGKKLLKDVQLLLKLSHIG |
| 2K6V Chain:A ((14-172)) | ----------------------------------------------------------PKPVDFALEGPQGPVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEV-ADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVV-KEGRLVLLYSPDKAEATDRVVADLQALL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53428 for 913 contacts (-58.5/contact) +
2D Compatibility (PS) -13367 + (NN) -4450 + (LL) 4300
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -73895.0 ( -80.94 by residue)
QMean score : 0.575
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