Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSSSKLVNAVAQRLLDTIEQGRWVAGQMLPGQRELAEQMEISRPSLREAIMVLETLGVVRSLPGKGVMVLERSEPLREVAAPGEATMEDVLQLRYALEPFIVGIVAQSAGAAEISELRLLLLDLREAVEDGDPQALVEAYTAFHRRLVKLTSNPIFLSVSEQIGSALERSDNLVRRQPEYAEEILQEHDAILRAIRQHDSERASQAMRQHILNEGARLNIDLRLPQV
3C7J Chain:A ((23-230))
--PAHLARTVIEEKLRNAIIDGSLPSGTALR-QQELATLFGVSRMPVREALRQLEAQSLLRVETHKGAVVAPLIT----------EDAVDAYALRILLESEALRLSIPLLDADDLAAAASYIEQLEV---ETDFGQIGRLNRMFHLSLYAKTHNKRLMRLVEEGLNEEERFLRFNLSSMGLGKLSQDDHWQLLRLAEQKAVEPCVEALQYHLNRGVQAVTQYLQSQKA
General information:
TITO was launched using:
RESULT:
Template:
3C7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87400 for 1490 contacts (-58.7/contact) +
2D Compatibility (PS) -22851 + (NN) -12896 + (LL) 1120
1D Compatibility (HY) -3600 + (ID) 2200
Total energy: -127827.0 ( -85.79 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_3C7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C7J-query.scw
PDB file :
Tito_Scwrl_3C7J.pdb
: