Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYAEWIAVKVVVSKSIGTVGIRNATLQWGKFYRYTNKDDEISTEEVSSMNVQAGSPQWIASCGRENASSGTQGSFDCYDGNTKMGTFSWDDPWKSGATNTWSFTPASADYAGITSGGNATGTDIGEVTLTLGRFS |
| 1Y9L Chain:A ((6-115)) | --EKEWHIVPV--SKDYFSI---PNDLLWSF--NTTNKSINVYSKCISGK------AVYSFNAGKFMGNFNVKEVDGCFMDAQKIAIDKLFSMLKDGVVLKGN---KINDTILIEKDG--------EVKLKLIRGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6897 for 739 contacts (9.3/contact) +
2D Compatibility (PS) -11001 + (NN) 1107 + (LL) 1264
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -6183.0 ( -8.37 by residue)
QMean score : 0.167
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