Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTFNCPTEIEDAANNYGEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDPTHQLTNAFGVHIPEEGLALRGTFVINPEGVIKTVEIHSNEIARDVGETVRKLKAAQYTAAHPGEVCPAKWKEGEKTLAPSLDLVGKI
4MAB Chain:E ((1-186))
-SLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGE----KWKEGEATLAPSLDLVGKI
General information:
TITO was launched using:
RESULT:
Template:
4MAB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96919 for 1340 contacts (-72.3/contact) +
2D Compatibility (PS) -19789 + (NN) -5085 + (LL) 460
1D Compatibility (HY) -16400 + (ID) 5350
Total energy: -143083.0 ( -106.78 by residue)
QMean score : 0.680
(partial model without unconserved sides chains):
PDB file :
Tito_4MAB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MAB-query.scw
PDB file :
Tito_Scwrl_4MAB.pdb
: