Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSNGSSSRRTFLRLAALLLPAGALLGSLPGVRAAARPRKLYLAGPDVFRA-DAVAHGEALKALCARYGFEGLYPLDNALPKQLAEPREQAAWIYRANIGLIERADAVLANLNFFRGAEPDSGTAFEVGYATALGKPVYGYVDDAGSYAERIRRHAPELIGEDPTRDRDGMTLEEFGLPLNLMLAVPATLVVGDAEQALRQLASRRHG
2F62 Chain:A ((9-159))
--------------------------------------MRKIYIAGPAVFNPDMGASYYNKVRELLKKENVMPLIPTDNEA--------TEALDIRQKNIQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFTSDRRNMREKYGS----------GVDKDNLRVEGFGLPFNLMLYDGVE-VFDSFESAFKYFLANFPS
General information:
TITO was launched using:
RESULT:
Template:
2F62.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55589 for 1115 contacts (-49.9/contact) +
2D Compatibility (PS) -16027 + (NN) -8919 + (LL) 3236
1D Compatibility (HY) -12400 + (ID) 2850
Total energy: -92549.0 ( -83.00 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_2F62.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F62-query.scw
PDB file :
Tito_Scwrl_2F62.pdb
: