Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRLPIIDIAPLYGADRGAWNDVARRIDQACREWGFFYIAGHPLPAARFEALLAAAREFFALPVEEKLKIDITRSRNHRGYGAIATEQLDPALPSDFKETFDMALHLPAEHPDVRAGKSFYGPNRHPD-LPGWEALLEGHYADMLALARTVLRALAIALGIEEDFFDRRFEQPVSVFRLIHYPPASARQSADQPGAGAHTDYGCVTLLYQDAAGGLQVQNRQGEWIDAPPIDGTFVVNIGDMMARWSNDRYRSTPHRVISPR----GVHRYSMPFFAEPHMDTEIRCLPGCFDADNPPKYP-PTTCGDWLTSRFAQTYAYRRGETA |
| 3OOX Chain:A ((5-310)) | -SAIDPVSFSLYAK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGYIPFGVETAKGADHYDLKEFWHMGRDLPPG----HRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKD--AT--RAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREIK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201251 for 2353 contacts (-85.5/contact) +
2D Compatibility (PS) -33142 + (NN) -27334 + (LL) 960
1D Compatibility (HY) -22400 + (ID) 5050
Total energy: -288217.0 ( -122.49 by residue)
QMean score : 0.517
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