Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRPDSDAAPYEPVLEQTAQAWLVRLRGTPDAATRRAFEDWLAQRPAHAEAYARAEALWRLTEIPASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVACLLAMLWLGGWWQPGDWLQDWRADYVAAPGQVAEWKLADGSYLSLDAGSAVRV--RIDGGQRRVELLRGAAALRVKRDA-LPFVVEAGEGRARVLGTEFEVR--RGAGATRVTVLQGRVAVSAGTGAGAAEEVLGAGQQVGFADGKLGRPVA-IDAAAALAWRQGWLSFYRRPLAEVLDELARYYPGRILLLDDALGRQPVSGSFRSDDPEAALKSLQAVLGYRQQILFGRLVVIR-- |
4M0N Chain:A ((20-231)) | --------------------------------------------------------------------------------------------------------------------------LTEISVNHGEHKQVTLPDGTVVHLNAGTVMRYPTEFTSDIRLVEME-GEAFFNVMRDEGKPFIVRTRQADVKVLGASFNVKAYQEDELMAVSVRTGKVEVDMPE----SVMRLLPNEQIIVNNTNGEILKKNEDAQKVTAWLQGGLYFNRTPISSVIHDLERMYNQEIVLDPNVVFDDYIYGEHDNKSLEAVLNAIQYSTGIRYRKEESRIVLYKTS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111343 for 1569 contacts (-71.0/contact) +
2D Compatibility (PS) -22164 + (NN) -5851 + (LL) 10028
1D Compatibility (HY) -11600 + (ID) 2800
Total energy: -143730.0 ( -91.61 by residue)
QMean score : 0.442
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