Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPFPRFALRTLPALFLSLGCLAATVQAAEAVRYRFSQAAAPLAQALNAFSRASGQTLLYTAELPPQATAPALHGSLVAEEALQRLLQGSGLRARRIDERTLTLEPIPASGALDLDATTVSA------AAPAQGYRPAANASISRGDAPVLEIPQAISVVPAQALQDQRPRNLDDALGNISGITQANTLGGTQDAVMKRGFGDNRDGSIMRDGMPSVQGRNFTATA----------DHVEVLKGPASLLYGIQDPGGVVNVVSKKPQLQQANALTLRGSAYAHGRNGSGGQLDSTGPLGDSG-LAYRMILDHEDEDYWRDFGKSRETLVAPSLAW-YGEDTTVNLSYEHREFTTPFDRGTA-----IDPRTNRPLDIPRSRRLDEPFNITEGRSELTRLDLERQLDDTWKAHFGYGYSRETYDDNQARVMA-----VNADGTLTRRMDGTHGAVSSDSFTTLGLSGTLQLAGMQHDLQFG----MDHEKRKIFRADLLRDSKTSRFDYLD-----PVYGQVVPSTRVVAGDSDQTDKLRSDSLYFQDSIHLDERWILVGGARYQIYDQLAGRGRPFNANTDINGQKWVPRGGLVYRLSDEVSLYGSYMRSFKPNSTIAPLSTGETIDSAILPEEATSWELGAKLD-VPGRLSGTLALFDIRKKNVLVNELDGAGNSS--------VRAAGRVRSRGLELDLTGQLSERWSLIGSYAWLAAEVTEDPTLEGKRLQNVA-RNTASLSAVYEL-GQLFGGDRLRLGGGARYVGK-------RPGDPANSFDLPSYTVADAFASYDTRFGGHGVKFQLNVKNLFDRTYYPSSANRLYVAMGEPRQFQVSTTVEF |
| 2W16 Chain:A ((12-772)) | ------------------------------------------LGSALQEFGRQADIQVLYRPEEVRNKRSSAIKGKLEPNQAITELLRGTGASVDFQGNAITISVAEAADSSVDLGATMITSNQLGTITEDSGSYTPGTIATATRLVLTPRETPQSITVVTRQNMDDFGLNNIDDVMRHTPGIT-VSAYDTDRNNYYARGFSIN---NFQYDGIPST-ARNVGYSAGNTLSDMAIYDRVEVLKGATGLLTGAGSLGATINLIRKKPTHEFKGHVELGAGSWDNYRS----ELDVSGPLTESGNVRGRAVAAYQDKHSFMDHYERKTSVYYGILEFDLNPDTMLTVGADYQD-NDPKGSGWSGSFPLFDSQGNRN-DVSRSFNNGAKWSSWEQYTRTVFANLEHNFANGWVGKVQLDHKINGYHAPLGAIMGDWPAPDNSAKIVAQKYTGETKSNSLDIY----LTGPFQFLGREHELVVGTSASFSHWEGKSYWNLRNYDNTTDDFINWDGDIGKPDWG--TPSQYI-------DDKTRQLGSYMTARFNVTDDLNLFLGGRVVDY-----RVTGLNPTIRESG-RFIPYVGAVYDLNDTYSVYASYTDIFMPQDSWYRDSSNKLLE----PDEGQNYEIGIKGEYLDGRLNTSLAYFEIHEENRA--EEDALYNSKPTNPAITYAYKGIKAKTKGYEAEISGELAPGWQVQAGY---THKIIRDDS--GKKVSTWEPQDQLSLYTSYKFKGAL---DKLTVGGGARWQGKSWQMVYNNPRSRWEKFSQEDYWLVDLMARYQIT---DKLSASVNVNNVFDKTYYTNIGFYTSASYGDPRNLMFSTRWDF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 122926 for 5884 contacts (20.9/contact) +
2D Compatibility (PS) -73157 + (NN) -9233 + (LL) 5508
1D Compatibility (HY) -31200 + (ID) 9950
Total energy: 4894.0 ( 0.83 by residue)
QMean score : 0.220
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