Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPFSLAGLFGFALLLSGCGDEPPPAPPRPVLTVTVKTLKNDDLGRFAGSIQARYESVLGFRTNGRIASRLFDVGDFVGKGALLATLDPTDQQNQLRASQGDLASAEAQLIDAQANARRQEELFARSVTAQARLDDARTRLKTSQASFDQAKAAVQQARDQLSYTRLVTDFDGVITTWHAEAGQVVSAGQAVVTLARPEVREAVFDLPTEVAESLPA-DARFLVSAQLDPQARTTGSIRELGPQADASTRTRRVRLSLAQTPEAF-------RLGSTIQVQLSS------AGSVRSVLPASVLLERDGK-TQVWVVDGKQSSVALREVQVLS-RDERQVVIGQGLADGDRVVRAGVNSLKPGQKIKLDEDAR |
| 4L8J Chain:A ((8-325)) | ----------------------------RPVKTATVSS-QSVILKDFSGMVEAVEYVKLAFRVSGQIINLPVVEGQRVKKGQLIAAIDPRDISLQYAADKAAYETAAAQV-------ERNKRLLGRQAISLQEYE-------ISVANYQKAKSAYELSTNNMRDTKLLAPFDGSIETRLVENYQRVNSGEGIVRLVNTRKLRIKFTVPDDYLYLLRAKDATFKV--EFDTYKGTVFNAR-LEEYLDISTDGTGIPVTIIIDDAAFDRTIYDVKPGFTCNIRLASDIAPFIEEKLMNVPLSAVFGDSENKNTYVWIV--KDNKVNRREVTVYSPTGEANLLISKGLKPGETVVTAGVYQLVEGQRIKEVK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74441 for 1848 contacts (-40.3/contact) +
2D Compatibility (PS) -32978 + (NN) -9646 + (LL) 1992
1D Compatibility (HY) -18400 + (ID) 5000
Total energy: -138473.0 ( -74.93 by residue)
QMean score : 0.460
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