Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGGFNLSDWALRHQSLVWYLMAVSLVMGVFSYLNLGREEDPSFAIKTMVIQTRWPGATVDDTLEQVTDRIEKKLEELDSLDYVKSYTRPGESTVFVYLKDTTKAGDIPDIWYQVR--KKISDIQGEFPQGIQGPGFNDEFGDVFGSVYAFT--ADGLDFRQLRDY-VEKVRLDIRSVKDLGKVQMIGAQNEVIYLNFSTRKLAALGLDQRQVVQSLQAQNAVTPSGVVEAGPERISVRTSGNFRSEKDL-QAVNLRVNDRFYRLSDLASISRDFVDPPTSLFRYKGEPAIGLAVAMKEGGNILEFGEALNARMQEITGE-LPVGVGVHQVSNQAQVVKKAVGGFTRALFEAVVIVLIVSFVSLGL-RAGLVVACSIPLVLAMVFVFMEYTDITMQRVSLGALIIALGLLVDDAMITVEMMITRLELGDSLHDSATYAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYT-FTLFA-VIAVALLLSWIVAVLFAPVIAVHILPKTLKHKSEQKKGRIAERFDSLLHLAMRRRWTTIFLT-ALLFGVSLFLMKFVQHQFFPSSDRPELLVDLNLPQNSSIHETRAVMDRLEATLKDDEDIDHWSAYVG---EGAIRFYLP-LDQQLQNNFYGQLVIVTKDLEARERVAARLRDRLRKDYVGISTYVQPLEMG-----PPVGRPIQYRVSGPQIDKVREYAMGLAGVLDGNPNIGDIVYDWNEPGKMLKIDIAQDKARQLGLSSEDVAQIMNSVVTGSAVTQVRDDIYLVNVIGRAEDSERGSLETLESLQIVTPSGTSIPLKAFAKVSYELEQPLVWRRDRKPTITVKASLRGEIQPTDLVARLAPEVKRFADGLP---ANYRIEVGGTVEESGKAEGPIAKVVPLMLFLMATFLMIQLQSVQKLFLVASVAPLGLIGVVAALLPTGTPMGFVAILGILALIGIIIRNSVILVTQIDAFEKDGKTPWEAVLEATHHRTRPILLTAAAASLGMIPIAREVFWG-----PMAYAMIGGIVAATLLTLIFLPALYVAWYRIPEPGR |
| 4K0J Chain:A ((9-1012)) | ----------CFNRRGIVALVFAMVALYGWYAWKQLPLEAYPDIADTTSQVVTQVNGLAAEEVEQQITIPLEREIMGVPGMHVMRSKSTFGLSLITVVFKDGAE-----DYWSRQRLQERINGV--SLPYGAQ-PSL-DPLTSPIGEIYRYTLVSKTRDLRELSELQFWKVIPRLKQVAGVVDVANFGGLTTQFMLEFDPVMLSKYNISLNQITQAISENNANAGGSILNRGEQGLVVRGVGLIRNLDDLGNIVVTQ-----------GRVVLGNPQRHGILGMDRNPDTIQGITLLLKNENPSVVMEGVHAAVRDLNDNILPKDVKVVPYIDRSNLVDATVHTVGKTLMEGMFLVSLVLLLFLGSPRAAIIVAVTIPLSLLMAFILMHHFKIPANLLSLGA--IDFGIIVDGAIVVMENILRRR--------DIMQSVLQVARPIFFGMIVIITAYLP--LFAFQRIEYKLFSPMAFAVGFALFGALLVALLLIPGLA--------------ALVWLAPRYESVLNR---STRTAIGIAVATLVGV-MILGATIGRDFLPYLDEGSIWLQVTLPPGISLEKAGQMADNLRAATMEFPEVEHVVTQVGRNDEGTDPFSPSHIETAVTLHPYSTWTSGRDKQQLIEAMATRFRD-LPGTQVGFS---QPMIDGVLDKLAGAHSDLVVKVYGNDFAETRQVATAITRLLKTVPGAQDVIIDQEPPLPQVRIDVDRAAAARLGINVADVMALIQTGIGGSPVTQVFVEDRSYNVVARFIGSSRNDPEAIGNLTLTAANGAHVALAQVAHIRLAEGETTITREMNKRHLTVRLNLRGR----DLSTFLEEARMRIDKEVPYDRTHIQVAWGGQFENQQRAQARLAVILPMVLALMFVLLF-------QPALILMAVPLATLGGLVALHLRGMTLNVSSAVGFIALFGVAVLNAIIMIANL----------KEAVVRGAGERMRPVLMTATVAALGLIPAALAHGLGSDVQRPLATVVVGGLITATALTLVLLPALYYLIETR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K0J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -578647 for 7684 contacts (-75.3/contact) +
2D Compatibility (PS) -98502 + (NN) -42665 + (LL) 5048
1D Compatibility (HY) -70800 + (ID) 12400
Total energy: -797966.0 ( -103.85 by residue)
QMean score : 0.340
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