Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------MNRQI----LAAAILSLFSLAFSQAGFAEESSLMTNRMVDANQQAIEHQQELSASAAQA-GARSDS-
3RKL Chain:A ((2-81))
SKITINIKDNTIEYGHKEFVLSNLQEDIKNLAEIVYQLAKLIEKLSQYEEE-VDTELYNLLHEYAIYLAGATSMFIDSENK
General information:
TITO was launched using:
RESULT:
Template:
3RKL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3390 for 314 contacts (-10.8/contact) +
2D Compatibility (PS) -6851 + (NN) -4620 + (LL) 208
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -18003.0 ( -57.33 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_3RKL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RKL-query.scw
PDB file :
Tito_Scwrl_3RKL.pdb
: