Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MESLKPDESKRLSIEESDCVSAGFQCPEIHWQDFPTPNFDCSYSTSSQGR
4A54 Chain:B ((240-291))
GATTKEKNISVDVDADASSQLLSLLKSSTAPSDLATPQP--STFPQP------PVESHSS
General information:
TITO was launched using:
RESULT:
Template:
4A54.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3816 for 141 contacts (27.1/contact) +
2D Compatibility (PS) -4427 + (NN) 161 + (LL) 296
1D Compatibility (HY) 0 + (ID) 450
Total energy: -604.0 ( -4.28 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_4A54.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A54-query.scw
PDB file :
Tito_Scwrl_4A54.pdb
: