Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRTLATVMLAGGLLAAGQAVAEDHDMTPTHETDSGPLLWHNESLTYLYGKNFKINPPIQQTFTLEHASGWT--WGDLFIFFDQINYNGKEDASNGKNTYYGEITPRLSFGKLTGADLSFGPVKDVLLAGTYEFGEGD-----TEAYLLGPGFDLAIPGFDYFQLNFYYRKPDG-----NRVRAGAWQITPVWSYTIPV-GNSDILIDGYMDWVINNKSASTSRRNQSDYHANLHFNPQVKYDLGKALGYEPKHLY--VGLEYDYWSDKYGV-------------KDSQYFTTDQNTASFLVKYHF--- |
| 1TLY Chain:A ((9-275)) | ------------------------------------LSDWWHQSVNVVGSYHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPV------------PLFMEIEPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMSLSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDL----------GDDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGNFNVRSTGWGGYLVVGYNFHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8540 for 1510 contacts (-5.7/contact) +
2D Compatibility (PS) -23159 + (NN) 724 + (LL) 2296
1D Compatibility (HY) -10800 + (ID) 2000
Total energy: -41479.0 ( -27.47 by residue)
QMean score : 0.141
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