Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLERIARISDGFQSMAREQNLSLSERYHKQLRRLEKVARISDRYQQMMRD-LNLALKEASIRDPLTGLPNRRMLLERLREENERSQRHGQSYVLAMLDVDFFKQVNDTWGHDSGDRVLVEIARAMESELREYDLCGRWGGEEFLLLLPQTRLQDAGPVLERVRDSVRT--LAVRVGTEALSVTASVGVTEHRI-GETYSQTVNRADAALLDAKRSGRDKCVFAALPPLPAPSRPAPAR
2WB4 Chain:B ((261-453))
-----------------------LSARVKTQIQR--------KRYTDYLRNNLDHSL-ELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAA-------------
General information:
TITO was launched using:
RESULT:
Template:
2WB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76345 for 1381 contacts (-55.3/contact) +
2D Compatibility (PS) -20715 + (NN) -8797 + (LL) 3068
1D Compatibility (HY) -15600 + (ID) 3950
Total energy: -122339.0 ( -88.59 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_2WB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WB4-query.scw
PDB file :
Tito_Scwrl_2WB4.pdb
: