Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDLHIPGTQSTPAIQGDWQAGRLSMQGDSYPENSYELFGQVIDWVERFLADGQRPLELDLR-LLYLNTSSIKAMMDILDLLEEAHQGGRPVSLRWHYDRRNERVAELAEEFREDCSFPFAIQAHDE
1TH8 Chain:B ((10-81))
-----------------KQDVLIVRLSGELDHHTAEELREQVTDVLEN---RAIRHIVLNLGQLTFMDSSGLGVILGRYKQIKN---VGGQMVVCAVSPAVKRLFDMSGLFKIIRVEADEQFALQAL
General information:
TITO was launched using:
RESULT:
Template:
1TH8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21668 for 455 contacts (-47.6/contact) +
2D Compatibility (PS) -7410 + (NN) -1798 + (LL) 1328
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -34598.0 ( -76.04 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_1TH8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TH8-query.scw
PDB file :
Tito_Scwrl_1TH8.pdb
: