Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGTEASQANGPAQEYLTFTLGREEYAIDILRVQEIRGYDQVTAIANAPPFIKGVINLRGAIVPIVDLRIKFHLAEVTYDPFTVVIILNIGRRIVGVVVDSVSDVIALGGDAIRPPPEFGASFDTEYLLGLATAGERMLILVDIERLMTSREMALVDEAAA
2HO9 Chain:A ((11-164))
-----ASEPSG--QEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLDSAAS
General information:
TITO was launched using:
RESULT:
Template:
2HO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139846 for 1174 contacts (-119.1/contact) +
2D Compatibility (PS) -15997 + (NN) -4599 + (LL) 116
1D Compatibility (HY) -21600 + (ID) 5100
Total energy: -187026.0 ( -159.31 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_2HO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HO9-query.scw
PDB file :
Tito_Scwrl_2HO9.pdb
: