Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNIDKTLSPAWSRPLPRLAPPPSAAFARRLGDGLLPWLLPLGLALLWWVASHRHWMSAQVLPTPELVWQSARELL-AGELWSELAISLRRLAWGLLAGVASGAALGAWLGFSPR-AERLVFPTFSALAQIPTLAWIPLFMLFFGIGE---------------LLKLVVLVKAVVVP-VTIHTLVGVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELLAS-SEGIGYLMVQGRQLFMLDIVFVCILIIGLVGVGMDRAIQWLDRRLLHWPQAATGEFRRRPPGRGWQRLQVWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSGALDGSLPGALFDSLKRTLGGLLLGGGLGFLGGLLLGLWRPAERFFGPTFAALRQVAIFAWVPLLTAWFGLGEPAKLTFVAIAAFFPLLLATQRGIASLPPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSDGGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLNALGQRIEARATRWRHA |
| 3D31 Chain:C ((60-283)) | ------------------------------------------------------------IFEQITEDFSGLVKAAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGEPLESYIQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPMVGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192601 for 1598 contacts (-120.5/contact) +
2D Compatibility (PS) -20979 + (NN) -9556 + (LL) 23540
1D Compatibility (HY) -8000 + (ID) 2000
Total energy: -209596.0 ( -131.16 by residue)
QMean score : 0.338
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