Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKALTSSLLGLFAAPVLAGLLGAYVPLASAAPPKEIRIAVPDVSAGSSHSGGGVVDVLYTRQLLEKEFANDGIAVKWSFFK-G-AGPVVNEAFANGQVDFAYLGDLAAIIGKSGGLDSRLLAATARGVNHYLGVQPGSGIKTLEDLKGKRVGIFRGTASQLSFDNALASVGLSEKDLKVINLDFSAALSALAARQIDATWGLAGLFALRDRGLAEIPLSTRDLNGAGTLQ-ALLVGSGAFVDAHPDITERLLKVQLQAQDWLAREENRDAYIELVSKQASYPVVILQSEYRGRKLG--DALSPRLDADFLGRLDASIQAAKRFGLIRREFSAEQWAAPELLEAAGKLAKAKAVAQAAE---- |
| 3UIF Chain:A ((2-331)) | -----------------------------VEDLKVVRIASVATNVGGKTVYAG-SASLVVNGAFPEELRKQGIKVEWVPAAMASVGPVINEGFASGKIDFGIYGDLPPIILNASKPTVQLVAPWGTTSNSYLVVPKNSTAKSIKDLKGKKIALHRGRPWELAFSNLLQSEGLTFKDFKIVNVNPQVGAAALASGTVDGFFSLFDSYILEDRGVGKIIWSTKT-APVDWKLMGGVWARNDFVKQNPEITQAIVTAYLKSVHWVAQDENKETYIRE-YSNKIYPESVNRREYDQDNVSWRQRWSPLYDVALQEHYRKAVAYAQASGLTRTQADVQQMLNPHFVATALKELKLEGFWTPNAENLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134435 for 2733 contacts (-49.2/contact) +
2D Compatibility (PS) -34521 + (NN) -12374 + (LL) 2884
1D Compatibility (HY) -17600 + (ID) 4650
Total energy: -200696.0 ( -73.43 by residue)
QMean score : 0.533
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