Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLDSKLFDATLDLERVKVSVRTLV-KLSRQEQSAIIRTLNEFGFLLLRSEHGEDRQELLALKELFGRAAPH-PRADADGIVPISNARYVSGYLGSTPLEHKLHTDGAFLDTPEQLCSLQCVRNAREGGETLLASAGLAFERLRRRMPTKHLGLLRGDALT-------IVR--K-----------HQSSTQPVFRLN--GEALGIKFRQN-DGAAEVVEHPVAVEAFAELVAALEDPACQLRIKLEPGEILVLDNTAVLHGRTAFCANELREMRRLNFDGHGRLRAELELGFKVGL |
| 1OTJ Chain:A ((13-282)) | -------------YIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQA-ITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLD-T--HNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKPFYRA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OTJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51852 for 1994 contacts (-26.0/contact) +
2D Compatibility (PS) -25489 + (NN) -3271 + (LL) 1188
1D Compatibility (HY) -6400 + (ID) 2600
Total energy: -88424.0 ( -44.35 by residue)
QMean score : 0.335
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