Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIAQFVAVVLPILICTGIGFAWSRSAGPVDTRALVFLVANVGFPCLLLSSLDRPGLSIGMVAGVFLATALAVLAFALLGLVALRLLRMPVRRYLPSIMLPNSGNMGIPIAYLAFGEEALVYAVAFSTLIQVGHATLGVWFA--SGDITPASI---LRNPMIYALAVALGLIALGWSLPPPLRDVTRLLGGITVPLMLVMLGLSLAGLRLHETWRPLLLSLVRVWGGFAVGYGIAAGLGMAAVAAGTFAIQCGMPTAVLTYLLAKRYDGPVNEVAGMVLITTLLVLLSTPLFIQLLPRA |
| 4F4H Chain:A ((301-411)) | -----------------------------------------------------PGAIIGLSGGVDSALVLAV-AVDALGAERVRAVMMP-SRYTAGISTTDAADMARRVG-VRYDE------IAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGQPDIVPERILTRLPPYDVLDAIMRMYMEEDRPLAEIVAAGYSEADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103128 for 702 contacts (-146.9/contact) +
2D Compatibility (PS) -10521 + (NN) 4568 + (LL) 5820
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -110211.0 ( -157.00 by residue)
QMean score : 0.133
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