Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNASTSPLPASDQTLRGILLICAAVF-LFASHDGLS-KFLSGFYPIVMVVWARYLVHTLLMVAVFVPRNGLAVIRSRRPLMQLARALCLIGTSLFFTTGLRYLPLAEATAVNFLAPLLVTALSVPLLKE--KVSLGQWLAVLTG-FIGVLFIVRPGGALFTPAALFPLGSAL--CFGLYQLLTRMLANSDSPTTS-NFLAGIFNT---------LIMSLL-------VPFFW-----QTPSLLHGLMMIAL-GGC--GMGGHLLLTQAFRHAPPATLAPFSYGQII--------FAGLLGLLVFGHVPDAWALLGILVICASGLVVAWRRGR-- |
| 4R6Y Chain:A ((1-317)) | SMESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGGGGVVVERLAKERTNPQADVLVTAP-----------PFIQRAAAEKLLAN--FNTDTASAIP----DANNLYSPLVKNYLSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDAGFAYLGKLQANNVGPSASTGKLTALVNKGEIYVANGDLQMNLAQMERNPNVKIFWPANDKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDEHYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKVTES |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -308965 for 2195 contacts (-140.8/contact) +
2D Compatibility (PS) -28969 + (NN) -4031 + (LL) 1552
1D Compatibility (HY) -2000 + (ID) 3050
Total energy: -345463.0 ( -157.39 by residue)
QMean score : 0.230
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