Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQDQLKQAVAQAAVDHILPHLDSKSIVGVGTGSTANFFIDALARHKAEFDGAVASSEATAKRLKEHGIPVYELNTVSELEFYVDGADESNERLELIKGGGAALTREKIVAAVAKTFICIADASKLVPILGQFPLPVEVIPMARSHVARQLVKLGGDPVYREGVLTDNGNIILDVHNLRIDSPVELEEKINAIVGVVTNGLFAARPADLLLLGTADGVKTLKA
4X84 Chain:C ((9-231))
MNQDQLKQAVAQAAVDHILPHLDSKSIVGVGTGSTANFFIDALARHKAEFDGAVASSEATAKRLKEHGIPVYELNTVSELEFYVDGADESNERLELIKGGGAALTREKIVAAVAKTFICIADASKLVPILGQFPLPVEVIPMARSHVARQLVKLGGDPVYREGVLTDNGNIILDVHNLRIDSPVELEEKINAIVGVVTNGLFAARPADLLLLGTADGVKTLKA
General information:
TITO was launched using:
RESULT:
Template:
4X84.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134834 for 1959 contacts (-68.8/contact) +
2D Compatibility (PS) -24328 + (NN) -10751 + (LL) 0
1D Compatibility (HY) -30400 + (ID) 11150
Total energy: -211463.0 ( -107.94 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_4X84.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X84-query.scw
PDB file :
Tito_Scwrl_4X84.pdb
: