Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELLWFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMAMLKKNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLFDFRFEDFELVGYEAHPHIKAPVAV
3IX6 Chain:A ((1-251))
MRTYLDLLQHVLDHGVDRDD----GTRSVFGYQMRFDLEEGFPVL---KLHLRSIIHELLWFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLHTNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIASYALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLFAFRFEDFRLDG-------------
General information:
TITO was launched using:
RESULT:
Template:
3IX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -220686 for 1892 contacts (-116.6/contact) +
2D Compatibility (PS) -26525 + (NN) -19473 + (LL) 1288
1D Compatibility (HY) -34000 + (ID) 9600
Total energy: -308996.0 ( -163.32 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_3IX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IX6-query.scw
PDB file :
Tito_Scwrl_3IX6.pdb
: