Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKITDDCINCDVCEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDDANVESKDQLMEKYRKITGKA
2FGO Chain:A ((2-81))
--LKITDDCINCDVCEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDDANVESKDQLMEKYRKITGK-
General information:
TITO was launched using:
RESULT:
Template:
2FGO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33088 for 550 contacts (-60.2/contact) +
2D Compatibility (PS) -8799 + (NN) -10844 + (LL) 324
1D Compatibility (HY) -12000 + (ID) 4000
Total energy: -68407.0 ( -124.38 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_2FGO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FGO-query.scw
PDB file :
Tito_Scwrl_2FGO.pdb
: