Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFQRVHQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPGENCRVEIPVAKQLVAGHLSIQPETFSRIMHRLGDEGIIHLDGREISILDRERLECFE
3DKW Chain:A ((1-227))
MEFQRVHQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPGENCRVEIPVAKQLVAGHLSIQPETFSRIMHRLGDEGIIHLDGREISILDRERLECFE
General information:
TITO was launched using:
RESULT:
Template:
3DKW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130092 for 1493 contacts (-87.1/contact) +
2D Compatibility (PS) -23640 + (NN) -8996 + (LL) 0
1D Compatibility (HY) -33200 + (ID) 11350
Total energy: -207278.0 ( -138.83 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3DKW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DKW-query.scw
PDB file :
Tito_Scwrl_3DKW.pdb
: