Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYSRIALFGGFAAAALLAGCSASSGKPGGKDWTRWTCDSKAVIEWRYIDGSKNIVDLRLKDEDDVVHHLEQEPAAVGAFYSD----GRLGFHLENDEGLVYWVETDDLIGRGCKAR
3PZB Chain:B ((282-327))
--------------------------------------------------------------EDDVAHQIY--PQAINAVGSRDTFVGRIRKDLDAEKGIHMWVVSDNLLKGAAWNS
General information:
TITO was launched using:
RESULT:
Template:
3PZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4049 for 192 contacts (21.1/contact) +
2D Compatibility (PS) -4472 + (NN) -1228 + (LL) 3568
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -2133.0 ( -11.11 by residue)
QMean score : -0.029
(partial model without unconserved sides chains):
PDB file :
Tito_3PZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PZB-query.scw
PDB file :
Tito_Scwrl_3PZB.pdb
: