Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLDMAKVGDPADFVPGAVQPCGVGIFVWTTLLAYNPGKV-AGSPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYIH-WWKSGQDPVRDLADGTVVMSSAYNGRIAAAQAEKQRLAMVWSGGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKA--VGLLDPQVAANLPTAPQNMQNAVGMNVAFWAE-HGEALEQRFQNWAKR |
| 4I1D Chain:A ((5-323)) | ------------------------ITFVSQGGAYQAAQTVAILDPSAKKLGITINQDSIPDAWPAIKTQVGSGKPIWDVVDTPTGYCLRGGEQGLIEKLDFSKIPNAAAMPEAYRSPYSVSYEFYSSVLAYSQKTFPKDAPNSWVDFWDVKKFPGRRALRNHPIATLEAALMADGVAPDKLY-----PLDVDRAFKKLEEIKPHITVWWTSGAQSAQLLNDGEVDMEMAWNGRVSAVAKEGAKVSFTYNQGILQSTSLCILKGAPNLETAVKFLNEAVDPVHQANLPLHIDYGPGNPKAFETNVIKPERAAQLPSEPANAAKQALMSYAWWSSPAGEAAEKRWASFMQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143692 for 2733 contacts (-52.6/contact) +
2D Compatibility (PS) -34306 + (NN) -15707 + (LL) 2840
1D Compatibility (HY) -17600 + (ID) 5750
Total energy: -214215.0 ( -78.38 by residue)
QMean score : 0.487
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