Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLKPLLQQGITPDRERLSDVQVRGSVFILDGVEYDFGRMQPG-----GYLPPEAYHDTPFIDIR--FVDGDRLYLHYIHQVTSEVMMQFPREIESIPVDQDGKVEVAFSYEHPMG
2FSD Chain:A ((4-113))
-DIPWTDLNRASGVGSTGILQ-ARIINGVIYVRGNSIPVPNVAPNFIVPVGTFPPAFGTNLPQFDSSGTFYSHGNLSLSLINMSPSGIAVGNPN-----NTSMNGK-TISFALSAPLL
General information:
TITO was launched using:
RESULT:
Template:
2FSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34228 for 695 contacts (-49.2/contact) +
2D Compatibility (PS) -11495 + (NN) -6629 + (LL) 912
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -57240.0 ( -82.36 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_2FSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FSD-query.scw
PDB file :
Tito_Scwrl_2FSD.pdb
: