Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTLAPESTRQNLRSQRLNLLTNEPHQRLESLVKSKEPFASRDNFARFVAAQYLFQHDLEPLYRNEALARLFPGLASRARDDAARADLADLGHPVPEGDQSVREADLSLAEALGWLFVSEGSKLGAAFLFKKAAALELDENFGARHLAEPEGGRAQGWKSFVAILDGIELNEEEERLAAKGASDAFNRFGDLLERTFA
1SK7 Chain:A ((12-198))
-----------NLRSQRLNLLTNEPHQRLESLVKSKEPFASRDNFARFVAAQYLFQHDLEPLYRNEALARLFPGLASRARDDAARADLADLGHPVPEGDQSVREADLSLAEALGWLFVSEGSKLGAAFLFKKAAALELDENFGARHLAEPEGGRAQGWKSFVAILDGIELNEEEERLAAKGASDAFNRFGDLLERTFA
General information:
TITO was launched using:
RESULT:
Template:
1SK7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61200 for 1448 contacts (-42.3/contact) +
2D Compatibility (PS) -20589 + (NN) -13233 + (LL) 712
1D Compatibility (HY) -21200 + (ID) 9350
Total energy: -124860.0 ( -86.23 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_1SK7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SK7-query.scw
PDB file :
Tito_Scwrl_1SK7.pdb
: