Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRYLVEICTFHGPTRQRRWHRVHQGGSRVECQRWVEELVAVFPTEEEARRSFGLTRERARQVYRIRGVRA
2X48 Chain:A ((1-54))
MKKEIQV--------QGVRYYVE---SEDDLVSVAHELAKMGYTVQQIANALGVSERKVRRYLES-----
General information:
TITO was launched using:
RESULT:
Template:
2X48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20701 for 356 contacts (-58.1/contact) +
2D Compatibility (PS) -6027 + (NN) -1894 + (LL) 264
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -30408.0 ( -85.42 by residue)
QMean score : 0.714
(partial model without unconserved sides chains):
PDB file :
Tito_2X48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X48-query.scw
PDB file :
Tito_Scwrl_2X48.pdb
: