Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNDDRIKLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKVIFPPGPLIFNALNTTPLENVKVVIIGQDPYHGPGQAHGLCFSVQPGVPTPPSLQNIYKELNRDLNIPIPNNGYLQRWAEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKLIDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSLPDL
3ZOQ Chain:A ((5-225))
---------LQDSWWNQLKEEFEKPYYQELREMLKREYAE-QTIYPDSRDIFNALHYTSYDDVKVVILGQDPYHGPGQAQGLSFSVKPGVKQPPSLKNIFLELQQDIGCSIPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHKGKGWERLTDRIIDVLSERERPVIFILWGRHAQMKKERIDTSKHFIIESTHPSPFSARNGFFGSRPFSRANAYLEKMGEAPIDWCIKDL
General information:
TITO was launched using:
RESULT:
Template:
3ZOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103833 for 1802 contacts (-57.6/contact) +
2D Compatibility (PS) -24120 + (NN) -12061 + (LL) 148
1D Compatibility (HY) -23600 + (ID) 6050
Total energy: -169516.0 ( -94.07 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3ZOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZOQ-query.scw
PDB file :
Tito_Scwrl_3ZOQ.pdb
: