Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLRASFVLLALSCAAPLLSLAEPLRFAGDDGCPYLCPGTPQRPGYLVE---ALSQVLREPPHFDSLPWPRAVQMVRDGHRDGLVGAYGLD-----GLRVGSEPIGWVGLAFYTRHDSDWHYSGDASLLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGELPGRQPLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE |
2YLN Chain:A ((80-275)) | ------------------------------------------TGYDVEVTRAVAEKLGVKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADI----KGVKTAQSLTSNYGEKAKAAGA-----QLVPVDG---LAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGVKIVWSA--PADEKVGSGLIVNKGN-DEAVAKFSTAINELKADGTLKKLGEQFFGKDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54221 for 1427 contacts (-38.0/contact) +
2D Compatibility (PS) -20407 + (NN) -13306 + (LL) 3292
1D Compatibility (HY) -4800 + (ID) 2500
Total energy: -91942.0 ( -64.43 by residue)
QMean score : 0.345
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