Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLRASFVLLALSCAAPLLSLAEPLRFAGDDGCPYLCPGTPQRPGYLVE---ALSQVLREPPHFDSLPWPRAVQMVRDGHRDGLVGAYGLD-----GLRVGSEPIGWVGLAFYTRHDSDWHYSGDASLLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGELPGRQPLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE
2YLN Chain:A ((80-275))------------------------------------------TGYDVEVTRAVAEKLGVKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADI----KGVKTAQSLTSNYGEKAKAAGA-----QLVPVDG---LAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGVKIVWSA--PADEKVGSGLIVNKGN-DEAVAKFSTAINELKADGTLKKLGEQFFGKDI


General information:
TITO was launched using:
RESULT:

Template: 2YLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54221 for 1427 contacts (-38.0/contact) +
2D Compatibility (PS) -20407 + (NN) -13306 + (LL) 3292
1D Compatibility (HY) -4800 + (ID) 2500
Total energy: -91942.0 ( -64.43 by residue)
QMean score : 0.345

(partial model without unconserved sides chains):
PDB file : Tito_2YLN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YLN-query.scw
PDB file : Tito_Scwrl_2YLN.pdb: