Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLILTRRVGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVAVHREEIYQRIQKEKDQEPNH
2MFF Chain:C ((1-52))
MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKDVAVHREEIYQRIQAGLTAPD--
General information:
TITO was launched using:
RESULT:
Template:
2MFF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19942 for 233 contacts (-85.6/contact) +
2D Compatibility (PS) -5958 + (NN) -1525 + (LL) 168
1D Compatibility (HY) -7600 + (ID) 2000
Total energy: -36857.0 ( -158.18 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_2MFF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MFF-query.scw
PDB file :
Tito_Scwrl_2MFF.pdb
: