Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSRLLSGIGAGPDSGSYTDLNRLNQLKVGKDRDGEANIRKVAQEFESLFLNEMLKSMRSANEALGDGNFMNSQTTKQYQDMYDQQLSVSLSKNAGGIGLADVLVRQLSKMKQGSRGNGENPFARVAENGAGRWPSNPSAQAGKALPMPEAGRDDSKLLNQRRLALPGKLAERMLAGIVPSASPAASQMQSLGQDSYLPAQSYPAASRRGFSTDGVDSQGSRRIAQPPLARGKSMFASADEFIATMLPMAQKAAERIGVDARYLVAQAALETGWGKSIIRQQDGGSSHNLFGIKTGSRWDGASARALTTEYEGGKAVKEIAAFRSYSSFEQSFHDYVSFLQGNDRYQNALDSAANPERFMQELQRAGYATDPQYARKVAQIA--RQMQTYQAVAAAGTPPLG |
2ZYC Chain:A ((2-164)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQAFVDATWPQAAKAAQSLGVPAHFLVAQAALETGWGKSQIRNKDGTPSYNLFNIKAGSNWTGKVVEARTVKV-------RVERFRAYDSYEQAFQDYADLVGNSPRYAKVAG-KTDGHAFARALQEGGYATDPSYADKLARVINGNALRQRLMASAASARGLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73392 for 1125 contacts (-65.2/contact) +
2D Compatibility (PS) -16970 + (NN) -9048 + (LL) 10952
1D Compatibility (HY) -9600 + (ID) 3350
Total energy: -101408.0 ( -90.14 by residue)
QMean score : 0.696
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