Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSKISEYTEKEFLEFVKDIYTNNKKKFPTEESHIQAVLEFKKLTEHPSGSDLLYYPNENREDSPAGVVKEVKEWRASKGLPGFKAG
4QKO Chain:C ((1-87))
MKSKISEYTEKEFLEFVKDIYTNNKKKFPTEESHIQAVLEFKKLTEHPSGSDLLYYPNENREDSPAGVVKEVKEWRASKGLPGFKAG
General information:
TITO was launched using:
RESULT:
Template:
4QKO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7713 for 574 contacts (-13.4/contact) +
2D Compatibility (PS) -9618 + (NN) -9836 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 4350
Total energy: -41517.0 ( -72.33 by residue)
QMean score : 0.802
(partial model without unconserved sides chains):
PDB file :
Tito_4QKO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QKO-query.scw
PDB file :
Tito_Scwrl_4QKO.pdb
: