Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSRRELFRRLGGHPPTRRPPWTAADFAAGCTGCAACVGACPEGVLKLGAGRLVELDLSSAGCTLCGECASRCEAGLFDGARPAFPWIATIGEACLALAGIHCRSCQDACEPAAIRFRPAPGGVALAELDSQRCNGCGACLAPCPSQ--AIQLRALSTKESPRHA---------
1B0P Chain:A ((668-784))
----TSQFEKRG--VAINVPQWVPEN----CIQCNQCAFVCPHSAILPVLAKEEELVGAPANFT-----------------------------------------------ALEAKGKELKGYKFRIQINTLDCMGCGNCADICPPKEKALVMQPLDTQRDAQVPNLEYAARIP
General information:
TITO was launched using:
RESULT:
Template:
1B0P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21985 for 712 contacts (-30.9/contact) +
2D Compatibility (PS) -10945 + (NN) -6153 + (LL) 3380
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: -38503.0 ( -54.08 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_1B0P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0P-query.scw
PDB file :
Tito_Scwrl_1B0P.pdb
: