Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFEHLVQVNDRTLVDLPVLDRLQLWEGLVCRAREPQYFVVGLERFEILVDDGDRLHRRLYLPGLVVEDEVVLKAPDSAHYSIKPSAEVAGGSLDMTIEEPEPGSLFVRFAYCTRYLQPLGDELPYDAFVKQAYIAMDVETIATIRDRFGASAASGS
2FFS Chain:A ((2-151))
-QFEHLVQVNDRT---LPVLDRLQLWEGLVCRAREPQYFVVGLERFEILVDDGDRLHRRLYLPGLVVEDEVVLKAPDSAHYSIKPSAEVAGGSLDMTIEEPEPGSLFVRFAYCTRYLQP--DELPYDAFVKQAYIAMDVETIATIRDRFGA------
General information:
TITO was launched using:
RESULT:
Template:
2FFS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39879 for 929 contacts (-42.9/contact) +
2D Compatibility (PS) -15138 + (NN) -2385 + (LL) 708
1D Compatibility (HY) -11600 + (ID) 4650
Total energy: -72944.0 ( -78.52 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_2FFS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FFS-query.scw
PDB file :
Tito_Scwrl_2FFS.pdb
: