Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------MDERFRGSVSHAYQAFHGELLRFLRKHLGSSADAADLAQDTFAQWLKWPGR-QSVEQPRAFLFQIARNLLRDHWRRQQSRGQDLDRPAANDEPAALEGEAAGPGERFEQQQRLSHLAAALAELPPRRREAFVLHKFDGLSQVEVAERMGISLSMVEKHIASALLHCKRRLGQGGEG
1OR7 Chain:A ((-1-187))
HMSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVP-SGDVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRR-----PPSSDVDAIEAENFESGGANLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQP----
General information:
TITO was launched using:
RESULT:
Template:
1OR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57132 for 990 contacts (-57.7/contact) +
2D Compatibility (PS) -18565 + (NN) -16853 + (LL) -468
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -101668.0 ( -102.69 by residue)
QMean score : 0.709
(partial model without unconserved sides chains):
PDB file :
Tito_1OR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OR7-query.scw
PDB file :
Tito_Scwrl_1OR7.pdb
: