Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCAYRREIHHAHVAIRDWLAGDSRADALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRPGLRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHRDDEGRLYWRHLQETFCG
1TP6 Chain:A ((3-128))
--CAYRREIHHAHVAIRDWLAGDSRADALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRPGLRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHRDDEGRLYWRHLQETFCG
General information:
TITO was launched using:
RESULT:
Template:
1TP6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45063 for 868 contacts (-51.9/contact) +
2D Compatibility (PS) -14040 + (NN) -9305 + (LL) 260
1D Compatibility (HY) -15600 + (ID) 6300
Total energy: -90048.0 ( -103.74 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_1TP6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TP6-query.scw
PDB file :
Tito_Scwrl_1TP6.pdb
: