Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRRNEPSPLPTKRPLAPLMLLMAACSSPALAEDAARKDDPLELGADTVTGEQASSRVERSASA-KYAVPLLDTPQTVTVVPQKVIQEQNALSLRQVLSNVSGITFNAGEGGGGSGDSINIRGFSANANMQ---VDGLR---DSAQTSRSDLFNLEAVEVIKGPNSVFGGAGTSGGSINMVSKQPKAEAFTHLGAGLGTDRYRRLTLDTNQPLEGLGESTAFRLNLMAHHNDVAGREQIDKQRWGIAPSLTFGLDTPTRLT-LSYFHQRDDN-----LPDYGV--PALNGRKLDGVSRHDYFGWRNLDEERIDNDVATLKLEHDFSDDFQLQNLIRYSH--LHRDTV----ISASHVNQKGLPPGRYLPAGPQAY------GRDSKTRMWINQTNLTGRFDTFGLAHTLIGGFELSRETYDRTTYSYNLGKFYPANGFDLHNPPGYWNGPT----------DKRDSA-----RNRTELEVKALYAFDTIALDERWD---LSLGLRYDWIDGTSRSTPSGKPTVRADSSDGKLSTRAGLVFKPLENGRV-YFSYGTSFNPSAEHLVTTGSGVTEATGGLAPEKNSTYELGTKWEFLGRRLELDAALFQVKKEDARERLADGSY--VLAGEQRVRGLELSASGKLNEHWDLFATYTYLDSETLKSSNPQREGQALGNTPPRSLSLWSTYELPE----GVTLGYGARYVSQRNVTSVDNGKLDAYWVHNMMLGYQATR----DLKLQLNLDNLFDKAYVERVRQVYGNQSRSSAIEYGDGRTAILSAIYAF |
| 1QJQ Chain:A ((23-725)) | --------------------------------------------------GPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGT-RGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDG-VYSYRLTGLARSAN-AQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNE---GAKNNTYSRNEKMVG-YSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDINAW---FGYDDSVPLLNLYNPSSHHHHHHGSSVNTDFDFNAKDPANSGPYRILNKQKQTGVYVQD----QAQWDKVLVTLGGRYDWADQESLNRVAGT----TDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQ--------VGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAE--YTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNTYG-------CFWGAERQVVATATFRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 157122 for 5472 contacts (28.7/contact) +
2D Compatibility (PS) -67148 + (NN) -9097 + (LL) 4392
1D Compatibility (HY) -24400 + (ID) 9600
Total energy: 51269.0 ( 9.37 by residue)
QMean score : 0.137
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